YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76640389
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGAGPGRGP RLCARRALSA GSGCIAGCIN NSERRRRRQR PGRGSGSIAR GARLPRSAGR  60
   61 PEVSRAASAE LNTDLRRGLR SRAGAGGRLA QAAPGVGGGV GAGAAMLGVV ELLLLGAAWL 120
  121 AGPARGQNET EPIVLEGKCL VVCDSNPTSD PTGTALGISV RSGSAKVAFS AIRSTNHEPS 180
  181 EMSNRTMIIY FDQVLVNIGN NFDSERSTFI APRKGIYSFN FHVVKVYNRQ TIQVSLMLNG 240
  241 WPVISAFAGD QDVTREAASN GVLIQMEKGD RAYLKLERGN LMGGWKYSTF SGFLVFPL

Type	Start	End	Confidence
Cytoplasmic	1	94	0.66
Transmembrane Helix	95	120	0.70
Non-Cytoplasmic	121	298	0.89