YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76640228
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAEFVIKKE FEELERHQAL CRYTLSLSQS AKFLYKVEMI MPVLLVKRKL SLKETGWPRL  60
   61 RKLVRTEREV DFQEVGSGNR NSGGKEVISG PMATVVASGG DGKEQGVETS VTYYRLEEVA 120
  121 KRNSPKDIWL VIHGRVYDVS RFLDEHPGGE EVLMEQAGGD ATESFEDVGH SSDAREMLKQ 180
  181 YYIGDVHPND LKPGGGSKEP PKSNTCKSYW SYWIFPIVGA ILLGFLYRYY MAESKSS

Type	Start	End	Confidence
Non-Cytoplasmic	1	208	0.65
Transmembrane Helix	209	231	0.90
Cytoplasmic	232	237	0.62