YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76640009
Protein type:	Globular with Signal Peptide
Type Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSYSVHPAS ASWVLMQPGI VQGTGDLAKW SRETLQQPEH ASAPHSRTHR LEHPSPLTIQ  60
   61 EETPRTSCSM GSGRRKVSWT LCFLLLLLLE ATSTKNLWKR ALPSRLAERA RVSAQAEEVG 120
  121 GSRQPRADRC PPPPRSLPPG ACQAARCQAD SECPRHRRCC YNGCAYACLE AVPPPPVLDW 180
  181 LVQPKPRWLG GNGWLLDGPE EVLQAEACST TEDGAEPLLC PSGYECHILS PGDLAAGIPN 240
  241 RGQCVKQRKP ADGRFLRQKF YKEYPEGASK YVAEHGQGQQ RHFQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.44
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	284	0.94