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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76637952
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISWDMIHTI FLLALLYPSR AQDAIPQSEV EAEEIPEGAS TLAFVFDVTG SMYDDLVQVI  60
   61 EGASKILETS LKRPKRPLFN FALVPFHDPE IGPVTVTTDP KKFQYELREL YVQGGGDCPE 120
  121 MSIGAIKIAL EISLPGSFIY VFTDARSKDY RLTHEVLQLI QQKQSQVVFV LTGDCDDRSH 180
  181 IGYRVYEEIA STSSGQVFHL DKKQVNEVLK WVEEAVQASK VHLLSTDHLE QAENTWKIPF 240
  241 DPSLKEVTVS LSGPSPMIEI HNPLGKLIKK GFGLNELLNI HNSAKVVNVK EPEAGIWTVK 300
  301 TSSTGRHSVR ITGLSTIDFR AGFSRKPTLD FKKTVSRPVQ GIPTYVLLNT SGISIPAKVD 360
  361 RLELLSISGS SLKTIPVKYY PDRKPYGIWN ISDFIPPNEA FFLKVTGYDK DGFLFQRVSS 420
  421 VSFSSIVPDA PKVTMPKKTP GYYLQPGQIP CAVDSLLPFT LSFVRNGATL GVDQYLKESA 480
  481 SVTWDIEEVT LADEGAYECV AVSTAGIGRA QTFFDVSEPP PVIQVPSNVT VTPGETAVLT 540
  541 CLVVSAVGYN LTWQRNDRDI RLTDTAGMRI LANLSLELRS VKFSDAGEYR CVVSNEGGSS 600
  601 TEAVFLTVQE PPKVTVMPKN QSFTAGSEVS IMCSATGYPK PKIAWTMNDV FIMGSHRYRM 660
  661 TSEGNLFIKN AVPKDAGIYG CLASNSAGMD KQTSTLRYIE APKLIVVQSE LLVALGDTTV 720
  721 MECKTSGVPP PQVKWFKGDL ELKPSTFLIT DPLLGLLKIQ ETQDLDAGDY TCVAVNDAGR 780
  781 ATGRITLDVG SPPVFIQEPT DVSVEIGSNV TLPCYVQGYP EPKIKWRRVD NMPIFSRPFS 840
  841 VSSISQLRTG DLFISNLWAS DKGTYICEAE NQFGKIQSQT TVTVTGLVAP LIGISPPVTS 900
  901 VIEGQQLTLP CALLAGNPIP ERRWIKNSAM LVQNPYITVR SDGSLHIERV RLQDGGEYTC 960
  961 VASNVAGITN KTTTVDVHVL PTIQHGQQIL STIEGIPVTL PCKASGIPKP SIAWSKKGEL1020
 1021 IFTSSAKFSA GADGSLYVVS PGGEESGEYV CTATNAAGYA KRKVQLTVYV RPRVFGDQRG1080
 1081 PSQDKPVEIS VFAGEEVTLP CEVKGLPPPI ITWAKETQLI SPFSPRHTFL PSGSMKITET1140
 1141 RVSDSGMYLC VATNIAGNVT QSVKLNVHVP PKIQRGPKVM KVQVGQRVDI PCSAQGTPLP1200
 1201 VITWFKGGGA VLVDGLQHIR HPDGTLSIKQ AVLSDAGIYT CVATNIAGSD ETEITLHVQE1260
 1261 PPILEDLEPP YNTPFQERVA NQRIAFPCPA KGTPKPTIKW LRNGRELTGQ EPGISILEDG1320
 1321 TLLVIASVTP YDNGEYICVA VNEAGTTERR YNLKVHVPPV IKDKEQVTNV SVLVNQPTSL1380
 1381 FCEVEGTPSP IIMWYKDDVQ VTESSSIQIV NNGKILKLFR TSPEDAGGYS CKAVNVAGTS1440
 1441 QKHFNIDVLV PPTIIGAGSP GEVSVVLNQN TTLECQVKGT PFPVIRWLKD GKPLFLGDPN1500
 1501 IEILDRGQVL HLKNARRSDK GRYQCSVSNA AGKQAKDIKL TIYIPPSIKG GNVTTEVSAL1560
 1561 INSIIKLECE TRGLPMPAIT WYKDGQPVIS SSQALYVEKG QFLHIPRAQV SDSAAYKCLV1620
 1621 TNVAGTAEKS FHVDVYVPPV IEGDLAEPLN KQVKVAHSLT LECKAAGNPP PVLTWLKDGV1680
 1681 PVKASDNIRI EAGGKKLEIT SALEVDRGQY ICVATSVAGE KEIKYEVDVL VPPAIEGGDE1740
 1741 TSYFIVMVNN LLELDCQVTG SPLPTIMWLK DGQLIDERDG FRILLNGHKL VIAQAQVSDT1800
 1801 GLYRCVATNT AGDHRKEFEV TVHVPPTIKS SGLSERAVLK YKPITLQCIA NGIPNPSITW1860
 1861 LKDGQPVNTA QGNLKVSMNI IMLKMRKLYK ELSYSLFLVI GFPVGQILRE MH

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