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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NOL9_BOVIN
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSLLLLKR VPSRHTWLRA RKARPQLMLS RRPRRRLRNL RWRSRRRLRR RLLQAQAAGA  60
   61 DWLQGGCLVS GDAALQRLKT SARRRASSPE PAEDPVPSGP AILPIPPVRP AGSGRAVLLL 120
  121 PLGQGFTFSG ICCVTCLYGQ VQVFGFTISQ GQPAQNVFST YTHSRLTINA VHYSVHEKSK 180
  181 KEMKREARVL LRPYLNQDDR YCLMSSFSPL CSIVLLERLK TSTVNFIISH PGLSYIFVQE 240
  241 VRTFQINSEY FALRSVGIRR EKKKTGLRLT ESAFAVMEEL VSISSEEADS CPVILVCGCQ 300
  301 DIGKSTFNRY LINQLLNSVS CVDYLECDLG QTEFTPPGCI SLLNITEPVL GPPFTHQRTP 360
  361 QKMVYYGKTS CKNNFENYIE VIKYVFSSYK RESPLIINTM GWVADQGLLL LIDLIRLLSP 420
  421 SHVVQFSSDR SKYMPDLTPD FVDDMDGLYT RRRSRVRNRG FHLPEFAESL EFADEEKEGP 480
  481 VMSTGYKLMF VKSEFVTGKT SRNRESHNRI LRELAVLGYL SQLQPPVPKP LRALHGLTPY 540
  541 QVPFNAVALR IIHADVAPTH ILYAVNASWV GLCKILDDVR GYASGPILLA QSPICDCVGF 600
  601 GICRGIDMEK KLYHILTPVP PEELRHVNCL LVGAVNIPQC VLKSQGGLEG TIPYVTTDYN 660
  661 FKLPGASEKI GARESGATYK EKGHPKPKFY RKTY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle