YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76636495
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGPAPLGVP ASGASSSRCG TNRTRAGTFQ QPRGRSRADV KRGNIDLSLR LPPGVIFRLL  60
   61 LRMVNLLPKL ESPVTRQEKM ATVWDEAEQD GIGEEVLKMS TEEIIQRTRL LDSEIKIMKS 120
  121 EVLRVTHELQ AMKDKIKENS EKIKVNKTLP YLVSNVIELL DVDPNDQEED GANIDLDSQR 180
  181 KGKCAVIKTS TRQTYFLPVI GLVDAEKLKP GDLVGVNKDS YLILETLPTE YDSRVKAMEV 240
  241 DERPTEQYSD IGGLDKQIQE LVEAIVLPMN HKEKFENLGI QPPKGVLMYG PPGTGKTLLA 300
  301 RACAAQTKAT FLKLAGPQLV QMFIGDGAKL VRDAFALAKE KAPSIIFIDE LDAIGTKRFD 360
  361 SEKAGDREVQ RTMLELLNQL DGFQPNTQVK VIAATNRVDI LDPALLRSGR LDRKIEFPMP 420
  421 NEEARARIMQ IHSRKMNVSP DVNYEELARC TDDFNGAQCK AVCVEAPHPR WLGKGARVGG 480
  481 RRPPFPVFLP PECLPDPGLA GAPERTGRTL AQGRSLPCWL PFGSWRWQEL PALPGSIRSE 540
  541 LVKGGPGHGR EKVPQPWSLA ARSRVHAPRG LPPRPRATEA SAGTALGLAA GLAPWAAHSS 600
  601 QHHAQRPLLG TATPVPYC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle