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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76636220
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRKKVDNRI RILIENGVAE RQRSLFVVVG DRGKDQVVIL HHMLSKATVK ARPSVLWCYK  60
   61 KELGFSSHRK KRMRQLQKKI KNGTLNIKQD DPFELFVAAT NIRYCYYSET HKILGNTFGM 120
  121 CVLQDFEALT PNLLARTVET VEGGGLVVVL LRTMNSLKQL YTMTMDVHSR YRTEAHQDVV 180
  181 GRFNERFILS LASCKKCLVI DDQLNILPIS SHAASIEALP PQTPSLGPSD LELKELKESL 240
  241 QDTQPVGVLV DCCKTLDQAK AVLKFIEGIS EKTLRSTVAL TAARGRGKSA ALGLAIAGAV 300
  301 AFGYSNIFVT SPSPDNLHTL FEFVFKGFDA LQYQEHLDYE IIQSLNPEFN KAVIRVNVFR 360
  361 EHRQTIQYIH PADAVKLGQA ELVVIDEAAA IPLPLVKSLL GPYLVFMAST INGYEGTGRS 420
  421 LSLKLIQQLR QQMRTLHEVS LQESIRYAPG DAVEKWLNDL LCLDCLNITR IVSGCPLPEA 480
  481 CELYYVNRDT LFCYHKASEV FLQRLMALYV ASHYKNSPND LQMLSDAPAH HLFCLLPPVP 540
  541 PTQNALPEVL AVIQVCLEGE ISRQSILNSL SRGKKASGDL IPWTVSEQFQ DPDFGGLSGG 600
  601 RVVRIAVHPD YQGMGYGSRA LQLLQMYYEG RFPCLEEKVL ETSQEIHTVS SEAVSLLEEV 660
  661 VTPRKDLPPL LLKLNERPAE HLDYLGVSYG LTPRLLKFWK RAGFVPVYLR QTPNDLTGEH 720
  721 SCIMLKTLMD EEEADQGAWL SAFWKDFRRR FLSLLSYQFS TFSPPLALNI LQNRNIGKPV 780
  781 QPALRREELE ALFLPYDLKR LEMYSRNMVD YHLIMDMIPA ISRLYFLNQL GDLALSAAQS 840
  841 ALLLGIGLQH KSVDQLEKEI ELPSGQLMGL FNRIIRKVVK LFNEVQEKAI EEQMVAVKDV 900
  901 VMEPTMKTLS DDLDEAAKEF QEKHRKEVGK LKDMDLSQYV IRGDDEEWNE VLNKAGQNAS 960
  961 IVSLKSDKKR KPEAKQEPKQ NKKLKKNRDM KNKKDMKLKR KK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle