YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76634100
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWGTRLALPA LVLAACCELA LGVLHVADED AGGVWGVTCC MVTLQCYTCP EPINVSYCVT  60
   61 ITTCNVNETM CKTTLYSLET VYPFLGDSTV TKSCASKCEP SDVDGIGWTR PVSCCNTDLC 120
  121 NVDGAPTLGG PCSLAAHSPE SGKPPLSATP FKGFLPLDGG KQPLDAQSSP TEGAPCLRDR 180
  181 RRAASEASYP SDPGNATPRL PAGKTRIPSQ LPGAGPLQTC CWESTLDKPP GTVGARRPGT 240
  241 FTQSQTPPPG PHLWVLTLSR RRPCPQLSTS PPTWLFPPLT KTRAAVGHLS LKLWIETQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	298	0.99