YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76633047
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKVEQVLSL EPQHELKFRG PFTDVVTTNL KLGNPTDRNV CFKVKTTAPR RYCVRPNSGI  60
   61 IDAGASINVS VMLQPFDYDP NEKSKHKFMV QSMFAPTDTS DMEAVWKEAK PEDLMDSKLR 120
  121 CVFELPAEND KPPGWHGPPF TLLCIVEDCI LAPASFNTWL VTLGLSFISE QHDVEINKII 180
  181 PTTASKTETP TVSKALSSSL DDTEVKKVME ECKRLQSEVQ RLREENKQFK EEDGLRMRKT 240
  241 AQSNSPAPAS AMAGKEEGLS TRLLALVVLF FIVGVIIGKI AL

Type	Start	End	Confidence
Cytoplasmic	1	258	0.83
Transmembrane Helix	259	281	0.87
Non-Cytoplasmic	282	282	0.87