YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76629804, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAARLGWG VAAAAAGLRN RFCHVTSPYT IKKQLLHQFF QRPLFPLPAT LCNTVRYMFI  60
   61 QTQDTPNPNS LKFIPGKPVL ETRTMDFPTP ATAFRSPLAR QLFRIEGVKS VFFGPDFITV 120
  121 TKENEELDWN LLKPDIYATI MDFFASGLPL VTEETPSGEA GSEDDDEVVA MIKELLDTRI 180
  181 RPTVQEDGGD VIYKGFEDGI VQLKLQGSCT SCPSSIITLK NGIQNMLQFY IPEVEGVEQV 240
  241 MDDESDEKEA NSP

Type	Start	End	Confidence
Signal Peptide	1	23	0.73
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	253	0.99