YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RM35_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASMFAGAV RAASGILRPL NILASSAYRN CTKNACLNSI LSSRHFSHIQ TPVVSSAPRL  60
   61 ITSVRNLTCG QTATVLNRMA LLLPNVLKPP VRTVTYCSSR KGKRKTVKAV IYRFLRLHSG 120
  121 LWLRRKAGYK KKLWKKTVAR KRRLREFVFC NKTQSKLLDK MTTSFWKRRN WYADDPYQMY 180
  181 HDRTNLKV

Type	Start	End	Confidence
Signal Peptide	1	15	0.58
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	188	0.97