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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76629176
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRQSTLFSF FPKSPAVNNA NKAPVRASSG SSAAAAATGA SPSPGGDAAW NEAGPEPLAG  60
   61 TTSRAEARNL NGGLRKSASP AVPASSCDFS PGDLVWAKME GYPWWPCLVY NHPFDGTFIR 120
  121 EKGKSARVHV QFFDDSPTRG WVSRRLLKPY TGSHSKEAQK GGHFYSAKPE ILRAMQRADE 180
  181 ALNKDKIKRL ELAVCDEPSE PEEEEETEVG ATYTSDKSEE ENDIESEEEV RPKVQGSRRS 240
  241 SRQIKKRRVI SDSESDVGGS DVEFKPDTKE EASSDEISSG VGDSDSEGLD TPVKVAPKRK 300
  301 RMVTGNGSLK RKSSRKEMPS ATKRATGISS ETKNTLSAFS VPQNSEPQAH ISGGCDDSNR 360
  361 PTVWYHETLE WLKEEKRRDV HRRRPDHPDF DASTLYVPED FLNSCTPGMR KWWQIKSQNF 420
  421 DLVIFYKVGK FYEMYHMDAL IGVSELGLVF MKGNWAHSGF PEIAFGRYSD SLVQKGYKVA 480
  481 RVEQTETPEM MEARCRKMAH ISKYDRVVRR EICRIITKGT QTYSVLEGDP SENYSKYLLS 540
  541 LKEKEEESSG HTRVYGVCFV DTSLGRFFIG QFSDDRHCSR FRTLVAHYPP VQVLFEKGNL 600
  601 SMDTKMILKS SLSSSLQEGL IPGSQFWDAA KTLRTLLEEG YFIDKLNEDG GVMLPQVLKG 660
  661 MTSESDSIGL TPGEKSELAL SALGGCVFYL KKCLIDQELL SMANFEEYVP LDSDMVHATR 720
  721 PGAVFAKANQ RMVLDAVTLN NLEIFLNGTN GSTEGTLLEK IDTCHTPFGK RLLKQWLCAP 780
  781 LCNPHAINDR LDAIEDLMVV PDKISEVVDL LKKLPDLERL LSKIHNVGSP LKSQNHPDSR 840
  841 AIMYEETTYS KKKIIDFLSA LEGFKVICKI IGIMEEVIDD FKSKILKQVL TLQTKSPEGR 900
  901 FPDLTSELNR WDTAFDHEKA RKTGLITPKA GFDSDYDQAL ADIRENEQSL LEYLEKQRSR 960
  961 IGCRTIVYWG IGRNRYQLEI PENFITRNLP EEYELKSTKK GCKRYWTKTI EKKLGNLINA1020
 1021 EERRDASLKD CMRRLFYNFD KNYKDWQAAV ECIAVLDVLL CLTNYSRGGD GPMCRPIILL1080
 1081 PEEDTPPFLD LKGSRHPCIT KTFFGDDFIP NDILIGCEEE EEENGKAYCV LVTGPNMGGK1140
 1141 STLMRQAGLL AIMAQMGCYV PAEVCRLTPI DRVFTRLGAS DRIMSGESTF FVELSETASI1200
 1201 LTHATAHSLV LVDELGRGTA TFDGTAIANA VVKELAENIK CRTLFSTHYH SLVEDYSQNV1260
 1261 AVRLGHMACM VENECEDPSQ ETITFLYKFI KGACPKSYGF NAARLANLPE EVIQKGHRKA1320
 1321 REFEKMTQSL RLFREVCLAS ERSTVDADAV HKLLTLIEEL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle