YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76628973
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTPPCAHCS GTSAMIGTET VLATATSAAT AEILERVEED GPEEGLLVNA GGLARRVAGE  60
   61 RTHGKRHSPG SGGPYASLCA AIGAVRDGAR LPELLWGRYC SLLKDFSVPS VPGSVMMNGS 120
  121 SVANTSPSVK SKEDQVLNGH DEKENPFAEY MWMENEEDFN RQVEEELQEQ EFLDRCFQEM 180
  181 LDEEDQDWFI PSRDLPQAMG QLQQQLNGLS VSDGRDSEDI LSKSNLNPDA KEFIPGVKY

Type	Start	End	Confidence
Signal Peptide	1	23	0.79
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	239	0.98