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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76627390
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGRLCVGRT AAAAAAATAA VAVPLAGGQE GSPGGVRRGS RGTTMVKKRK GRVVIDSDTE  60
   61 DSGSDENLDQ ELLSLAKRKR SDSEEKEPPV SQPAASSDSE TSNSDDEWTF GSNKNKKKGK 120
  121 ARKIEKKGTM KKQANKTASS GSSDKDSSAE SSAPEEGEVS DSDSNSSSSS SDSDSSSEDE 180
  181 EFHDGYGEDL MGDEEDRARL EQMTEKEREQ ELFNRIEKRE VLKKRFEIRK KLKTAKKKEK 240
  241 KEKKKKQEEE QEKKKLTQIQ ESQVTSHNKE RRSKRDEKLD KKSQAMEELK AEREKRKNRT 300
  301 AELLAKKQPL KTSEVYSDDE EEEEDDKSSE KSDRSSRTTS SDEEEEKEEI PPKSQPVSLP 360
  361 EELNRVRLSR HKLERWCHMP FFAKTVTGCF VRIGIGNHNS KPVYRVAEIT GVVETAKVYQ 420
  421 LGGTRTNKGL QLRHGSDQRV FRLEFVSNQE FTESEFMKWK EAMFSAGMQL PTLDEINKKE 480
  481 LSIKEALNYK FNDQDIEEIV KEKERFRKAP PNYAMKKTQL LKEKAMAEDL GDQDKAKQIQ 540
  541 DQLNELEERA EALDRQRTKN ISAISYINQR NREWNIVESE KALVAESHNM KNQQMDPFTR 600
  601 RQCKPTIVSN SRDPAVQAAI LAQLNAKYGS GVLPDAPKEM NKGQGKDKDL NSKSASDLSE 660
  661 DLFKVHDFDV KIDLQVPSSE SKALAITSKA PPAKDGAPRR SLNLEDYKKR RGLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle