YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76626950
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQNLREQLG EGASRLGRSS FLTSLFLQAM AFLAMVMGTH TLCLGSQRCC THWPSCCPSK  60
   61 GQNSTEEWLK WNSVLMPPPE TTSLAHHPEP CSSSRDGPLN SRSIAPWRYE LDRDLNRLPQ 120
  121 DLYHARCLCP HCVSLQTGSH MDPLGNSELL YHNQTVFYRR PCPGQQGDHH GYCLERRLYR 180
  181 VSLACVCVRP RVMA

Type	Start	End	Confidence
Cytoplasmic	1	20	0.73
Transmembrane Helix	21	42	0.77
Non-Cytoplasmic	43	194	0.92