YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AKIR2_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACGATLKRT LDFDPLLSPA SPKRRRCAPL SAPTSAAATP SSAAAATAAS FSAAAASPQK  60
   61 YLRMEPSPFG DVSSRLTTEQ ILYNIKQEYK RMQKRRHLET SFQQTDPCCT SDAQPHAFLL 120
  121 SGPASPGTPS GTSSPLKKEQ PLFTLRQVGM ICERLLKERE EKVREEYEEI LNTKLAEQYD 180
  181 AFVKFTHDQI MRRYGEQPAS YVS

Type	Start	End	Confidence
Signal Peptide	1	48	0.95
N-region	1	39
H-region	40	45
C-region	46	48
Cleavage Site	48	49
Non-Cytoplasmic	49	203	0.99