YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76625444
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIRLPPALA ALGAALLLSS IEAEVEPPSD LNFKIIDENT VHMSWAIPPD PIVGFKITVD  60
   61 PTTDGPTKEF TLSASTTETL LTELIPEIEY VVTITSYDEV EESVPVIGQL TIQTGGPTKP 120
  121 GEKKPGKTEI QKCSVSAWTD LVFLVDGSWS VGRNNFKYIL DFIAALVSAF DIGEEKTRVG 180
  181 VVQYSSDTRT EFNLNQYYQQ EELLAAIKKI PYKGGNTMTG EAIDYLIKNT FTESAGARVG 240
  241 FPKVAIIITD GKSQDEVEIP ARELRNIGVE VFSLGIKAAD AKELKQIAST PSLNHVFNVA 300
  301 NFDAIVDIQN EIISQVCSGV DEQLGELVSG EEVVEPPSNL IATEVSSKYV KLSWSPSPSA 360
  361 VTGYKVLLIP MTTGSRQHAL SVGPQTTTLS VRDLSADTEY QISVSAMKGL TSSEPVSIME 420
  421 KTQPMKVQVE CSRGVDIKAD IVFLVDGSYS IGIANFVKVR AFLEVLVKSF EISPNRVQIS 480
  481 LVQYSRDPHT EFTLKKFTKV EDIIEAINTF PYRGGSTNTG KAMTYVREKI FVPSKGSRSN 540
  541 VPKVMILITD GKSSDAFRDP AIKLRNSDVE IFAVGVKDAV RSELEAIASP PAETHVFTVE 600
  601 DFDAFQRISF ELTQSICLRI EQELAAIKKK AYVPPKDINF SEVTSNSLKT SWSPAGENVF 660
  661 SYHITYKEAT GDDQVTLVEP ASSTSVVLSN LKPETLYLVN VTAEYEDGFS IPLAGEETTA 720
  721 EVKGAPRNLK VTDETTDSFK ITWTQAPGRV LRYRITYRPV AGGESKEVTT PANQRRRTLE 780
  781 NLTPDTKYEV SVIPEYVSGP GSPLTGNAAT EEVRGNPRDL RVSDPTTSTM KLSWTRAPGK 840
  841 VKQYLITYTP VAGGDTQEVT VKGDTASTVL RGLNEGTQYA LSVTALYASG AGDALFGEGT 900
  901 TLEERGSPGD LITKDITDTS IGAYWTSAPG MVRGYRVSWQ SLYDDIETGE KSLPADVIHT 960
  961 VIENLQPETK YRVSIFATYS SGEGEPLSGE AMTELSEDSK TLKVDEETEN TMRVTWKPAP1020
 1021 GKVVNYRVMY RPRGGGRQMV AKVSPTVTST VLKRLQPQTT YDITVLPVYK TGEGKLRQGS1080
 1081 GTTASRFKSP RNLKTSDPTM SSFRVTWEPA PGEVKGYKVT FHPTGDDRRL GELVVGPYDN1140
 1141 TVVLEELRAG TTYKVNVFGM FDGGESSPLV GQEMTTLSDT TVMPILSSGM ECLTRAEADI1200
 1201 VLLVDGSWSI GRANFRTVRS FISRIVEVFE IGPKRVQIAL AQYSGDPRTE WQLNAHKDKK1260
 1261 SLLQAVANLP YKGGNTLTGM ALNFIRQQSF KTQAGMRPRA RKIGVLITDG KSQDDVEAPS1320
 1321 KKLKDEGVEL FAIGIKNADE VELKMIATDP DDIHAYNVAD FDSLSRIVDD LTNNLCNSVK1380
 1381 GPGDLEAPSN LVLSERTHRS MRVSWTPPSD SVDRYKVEYY PVSGGKRQEF YVSRLERSTV1440
 1441 LKDLKPETEY VVNVYSVVED EYSEPLKGTE KTLPVPVVSL NIYNIGSTTM HVQWQPVGGA1500
 1501 TGYTVTYEPI NATVPTKPKE MRLEPTVNDV QLSDLFPNTE YAVTVQAVLH DLTSEPVTAR1560
 1561 EVTLPLPSPR DLKLRDVTHS TMNVAWEPAP GKVRKYIVRY KTPEEEAKEV EVDRSRASTP1620
 1621 LKDLFSQTLY TVSVSAVYEE GESPPVTAQE TTHTVPAPTN LQITEVTPES FRGTWDHGAS1680
 1681 DVSLYRITWA PSGSADKMET ILNGDENTLV FQNLNPNTLY EVSVTAIYPD ESESDDLIGS1740
 1741 ERTLRLIPLT TQAPKSGPRN LQVYNATSNS LTVKWDPASG RVQKYRITYQ PSTGEGNEQT1800
 1801 TTIGGRQNSV LLQKLKPDTP YTITVSSLYP DGEGGRMTGR GKTKPLNTVR NLRVYDPSTS1860
 1861 SLNVRWDHAE GSPRQYKLFY APTAGGPEEL VPIPGNTNYA ILRNLQPDTQ YTVTVVPVYS1920
 1921 EGDGGRTSDT GRTLVRGLAR NVQVYNPTPN SLDVRWDSAP GPVQQYRIVY SPQDGTRPSE1980
 1981 SIVVPGNTYT VHLEQLIPDT PYSVNIVALY SDAEGNPSPA QGRTLPRSGP RNLRVFGETT2040
 2041 NSLSVAWDHA DGPVQQYRII YSPTVGDPID EYTTVPGRRN NVILQPLQPD TPYKITVIPV2100
 2101 YEDGDGTHLT GNGRTVGLLP PQNIHISDEW YTRFRVSWDP SPSPVLGYKI VYKPVGSNEP2160
 2161 MEVFVGEVTS YTLHNLNPST TYDVNVYAQY DSGLSVPLTD QGTTLYLNVT DLKTYQVGWD2220
 2221 TFCVRWLAHR AATSYRLKLS PADGTRGQEI TVRGSETSHC FTDLSPETDY GVTVFVQTPN2280
 2281 LEGPGVSVKE RTTLKPTEAP TEPPTPPPPP TIPPAREVCK GAKADIVFLT DASWSIGDDN2340
 2341 FNKVVKFIFH TVGGFDEISP AGIQVSFVQY SDEVKSEFKL NTYNDKALAL GALQNIRYRG2400
 2401 GNTRTGKALT FIKEKVLTWE SGMRKNVPKV LVVVTDGRSQ DEVKKAALVI QQSGFSVFVV2460
 2461 GVADVDYNEL ANIASKPSER HVFIVDDFES FEKIEDNLIT FVCETATSSC PLIYLDGYTS2520
 2521 PGFKMLEAYN LTEKNFASVQ GVSLESGSFP SYSSYRLQKN AFVNQPTVEL HPNGLPPSYT2580
 2581 IILLFRLLPE TPSDPFAIWQ ITDRDYKPQV GVIADPSSKT LSFFNKDTRG EVQTVTFDTD2640
 2641 EVKALFYGSF HKVHIVVTSK SVKIYIDCYE IVEKDIKEAG NITTDGYEIL GKLLKGERKS2700
 2701 ATFQIQNFDI VCSPVWTSRD RCCDIPSRRD EAKCPALPNA CTCTQDSVGP PGPPGPAGGP2760
 2761 GAKGPRGERG VSGAVGPPGP RGDTGPPGPQ GPPGPQGPNG LSIPGEQGRQ GMKGDAGEPG2820
 2821 LPGRTGTPGL PGPPGPMGPP GDRGFTGKDG AMGPRGPPGP PGSPGSPGVT GPSGKPGKPG2880
 2881 DHGRPGPSGL KGEKGDRGDI ASQNMMRAVA RQVCEQLISG QMNRFNQMLN QIPNDYHSSR2940
 2941 NQPGPPGPPG PPGSAGARGE PGPGGRPGFP GTPGMQGPQG ERGLPGEKGE RGIGSPGPRG3000
 3001 LPGPPGPQGE SRTGPPGSTG SRGPPGPPGR PGNSGIRGPP GPPGYCDSSQ CASIPYNGQG3060
 3061 YPEPYVPEGG HEPFIVPVEP ERTADEYEDY GADEPAGEHP PHARWRRALP HRPRQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle