YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76625089
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSRRHLRD RVIGAGIAHG SLASPAEFQN GSLQERARLE EPDLARPSRG ASRQHSSMNS  60
   61 QRAKARALEA EIAALRRACI ETQAPGDDDS QVRKSFQETH QSNSEEWGLS KDLRSHLGSL 120
  121 ESELQFLSRL TGISIRNYCK NTEDLTNTEM AEKSIKKVLQ RHRLSGNCHM ITFQLEFQIL 180
  181 EIQDKESLSS VITDLSIIME PTEYSELSEF VSRA

Type	Start	End	Confidence
Signal Peptide	1	23	0.71
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	214	0.99