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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76623405
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPIVPMIH PQVAIAASPA TLAGATAVSE WTEYKTADGK TYYYNNRTLE STWEKPQELK  60
   61 EKEKLEEKIK EPIKEPSEEP LPMETEEEDP KEEPIKEIKE EPKEEEMTEE EKAAQKAKPV 120
  121 ATTPIPGTPW CVVWTGDERV FFYNPTTRLS MWDRPDDLIG RADVDKIIQE PPHKKGMEEV 180
  181 KKLRHPTPTM LSIQKWQFSM SAIKEEQELM EEMNEDEPVK AKKRKRDDNK DIDSEKEAAM 240
  241 EAEIKAARER AIVPLEARMK QFKDMLLERG VSAFSTWEKE LHKIVFDPRY LLLNPKERKQ 300
  301 VFDQYVKTRA EEERREKKNK IMQAKEDFKK MMEEAKFNPR VTFSEFAAKH AKDSRFKAIE 360
  361 KMKDREALFN EFVAAARKKE KEDSKTRGEK IKSDFFELLS NHHLDSQSRW SKVKDKVESD 420
  421 PRYKAVDSSS MREDLFKQYI EKIAKNLDSE KEKELERQAR IEASLRERER EVQKARSEQT 480
  481 KEIDREREQH KREEAIQNFK ALLSDMVRSS DVSWSDTRRT LRKDHRWESG SLLEREEKEK 540
  541 LFNEHIEALT KKKREHFRQL LDETSAITLT STWKEVKKII KEDPRCIKFS SSDRKKQREF 600
  601 EEYIRDKYIT AKADFRTLLK ETKFITYRLK KKNLSLSIIF PPLKTKYLVI DSAEEERRKL 660
  661 IVAYVDDLDR RGPPPPPTAS EPTRRSTK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle