YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76622860
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESDRDREQQ DVLDGCQACW RLHVYNSLVL GIFVADDQSL LLVQGPMLVI CGAGAFVPAL  60
   61 GLGICCAGGV GTWPPLTLCV RSPSGKKFRS KPQLARYLGG SMDLSTFDFR TGKMLMSKVN 120
  121 KGRQRVRYDS PSQVKGKPDL NTALPVRQTA SIFKQPVTKI TNHPSNKVKS DPQKAVEQPR 180
  181 QLFWEKKLSG LNAFDIAEEL VKTMDLPKGL QGVGPGCTDE TLLSAIASAL HTSTTPITGQ 240
  241 LSAAVEKNPG VWLNTAQPLC KAFMVTDEDI RKQEELVQQV RKRLEEALMA DMLAHVEELA 300
  301 RDGEAPLDRV GADDEEDEDE EEEEPDQDPE MEHV

Type	Start	End	Confidence
Cytoplasmic	1	47	0.62
Transmembrane Helix	48	73	0.79
Non-Cytoplasmic	74	334	0.63