YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|194668759, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVALSDLASA LESYRGRDRL IRTLGYCCQL VGGVLVEQCP ARSEVGTRLL ALSSQLSHCR  60
   61 VVLRLFDDAA MFVYTKQYGL GAEEEDVFVR CVSILSNLAD QLYYPCEHVA WAADAKILHV 120
  121 DSARWWTLST TLWGLSLLLG VARSLWMVLK LRHRLRNPPE AFTSRLTRGK RRTVETQICS 180
  181 EVLTLLSNLA DLANAVHWLP PGVLWAGRFP QWLVGLLGTL SSLLSVYQAV QAGGQANATP 240
  241

Type	Start	End	Confidence
Non-Cytoplasmic	1	124	0.62
Transmembrane Helix	125	147	0.85
Cytoplasmic	148	208	0.59
Transmembrane Helix	209	230	0.76
Non-Cytoplasmic	231	240	0.44