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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76621793
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGSGEGAAG TILGRKGGKK KPLKQPRKQA KEMDQEDKTF KQKQKEEQKK LEELKAKASG  60
   61 KGPLARGEIK KFGRGYSGAQ KHLTLPLLVS PDPPTATERP WEGRPGPEGG AEGWPVPVGA 120
  121 EGAFRCRGGW YRLADTRWQP RAGSPYPKRR RGQLLAIASA LPWGPPSRLP PAPPPEQGPL 180
  181 SPLPAARLSS AHYLGAAPHH CKFRYLTLVS RQKEERWEVH RLRTTAQCPQ RSECDPGPWG 240
  241 GRPMEPGLLR PAPRVSEVIL QHYNYTGKLR GTRYQPGAGL RADAVVCLAV CALIMLENLA 300
  301 VLVVLGRHPR FHAPMFLLLG SLTLSDLLAG AAYAANILLS GPFTLRLSPG LWFAREGGVF 360
  361 VALSASVLSL LAIALERLLT MERRGPAPAS RRGRTLALAA AAWGLSLLLG LLPALGWNCL 420
  421 GRLEACSTVL PLYAKAYVLF CVLAFLGILA AICALYARIY CQVRSKARRL RAHPRTGEGA 480
  481 SMRARHTPRS LALLRTLSVV LLAFVACWGP LFLLLLLDVA CPARACPVLL QADPFLGLAM 540
  541 ANSLLNPIIY TFTNLDLRHA LLRLVCCNRG PCCRDPGASR RPGSAPGASG DLHRWLPPGL 600
  601 DGSSSRSERS SPQRDGLETS GSTACPGAPT VAGTLVTPPA TD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle