YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76621079
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGAARCAGS CVRRTMPPGG WRWLRGLWAA GQPLFQGRAL LVTNTLGCGV LMAAGDGARQ  60
   61 TWEIRARPGQ KFDPRRSVSM FAVGCSMGPF LHYWYLWLDR LFPASGFPGL PNVLKKVLID 120
  121 QLVASPMLGV WYFLGLGCLE GQTLDKSCQE LRDKFWEFYK ADWCVWPAAQ LVNFLFVPPQ 180
  181 FRVTYINGLT LGWDTYLSYL KYRIPGPLTP PGCVALGTIQ TEPPDARQQG KTD

Type	Start	End	Confidence
Non-Cytoplasmic	1	33	0.68
Transmembrane Helix	34	57	0.71
Cytoplasmic	58	76	0.87
Transmembrane Helix	77	96	0.95
Non-Cytoplasmic	97	116	0.90
Transmembrane Helix	117	139	0.64
Cytoplasmic	140	233	0.63