YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115497660, gi...
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASRLELNL VRLLCRCEAM AAEKRDPDEW RLEKYVGALE DMLQALKAQA SKPASEVLNE  60
   61 YSRKVDFLKG MLQAEKLTSS SEKALANQFL APGRVPTTAR ERVPATKTVH LQSRARYTSE 120
  121 MRSELLGTDS SEEPELDVRK RTGASGPTPR DEKQSAAELD LVLQRHQNLQ EKLAEEMLGL 180
  181 ARSLKTNTLA AQSVIKKDNQ TLSHSLKMAD QNLEKLKTES ERLEQHTQKS VNWLLWAMLI 240
  241 VVCFIFISMI LFIRIMPKLK

Type	Start	End	Confidence
Non-Cytoplasmic	1	232	0.91
Transmembrane Helix	233	253	0.97
Cytoplasmic	254	260	0.77