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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76620854
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGALSVWVSG LLTLQMLLFV AGEQGPQHTT AAAATAEKGL HMQKVGSGSV RAALAELVAL  60
   61 PCLFSLRPRP GAAREAPRIK WTKVRTASGQ RQDLPILVAK DNVVRVAKGW QGRVSLPAYP 120
  121 RHRVNATLLL GPLRASDSGL YRCQVVRGIE DEQDLVPLEV TGVVFHYRAA LDRYSLTFAE 180
  181 AQEACLLNSA TIAAPRHLQA AFEDGFDNCD AGWLSDRTVR YPITQSRPGC YGDRSSLPGV 240
  241 RNYGRRDPRE LYDVYCFARE LGGEVFYVGL ARRLTLAGAR AQCRRQGAVL ASVGQLHLAW 300
  301 HEGLDQCDPG WLADGSVRYP IQTPRRRCGG PAPGVRTVYR FANRTGFPAP GERFDAYCFR 360
  361 AHHPTSQHGD PETPSSGDEG EILSAEGPPA GELEPSLQEE EEVVTPDIQE PLVSSGEEES 420
  421 LILAEKQESQ ATPSRAPGVP TLASSPALEA EEVWLSTVAP SHSSVEAGTV VGTHTDTAPA 480
  481 STTPRKRERF KGLNGRHFQQ QEPQQGLKGA LEASIQPPTP EAAENYVEPP MTTGTTDALG 540
  541 SGQSQSPWAV LTNEVEMPRA GSLGGRSPQE PWLWLPTVVP PIIPDPSRAL GLELGEAKRF 600
  601 SMRPVTSDLP WSPSETTPNP SNGPSPTPWK ASPVAISPDL PVMAMLRAPK LWLLSQEPPT 660
  661 SLPTEASGVK GHSEAMATAL PSPASEIEAS PQDPIHLEVP PAPSQAATDT QAGASPNSPG 720
  721 ADFGNTRGAS PTELSKAEHP GSSPQASVDW NVVADITISE PATEPMGARG VSESESGVFN 780
  781 TAESPTSSLQ ASMDKTQEIW ASLHREGLDP HSPSAPLGVP EVPLMPKFTP GLGPWAATDG 840
  841 GVTVDPMAST VTLDTSDAGG HWEPGSHMVE GAESPTLSPQ MAVDTSVRVL AVFTVASSSS 900
  901 QPHPEPESQL VTQGTLGALE PPQEGSHSGD PILPPWTPTA ANKDEPISVS SGEPTVPWDS 960
  961 PSTLLPASLG PEEFELEVLM GSPSVESFWE EAASGEEPAL PGTPANGSPL DPCENNPCLH1020
 1021 GGTCRANGTM YGCSCDQGFA GENCEIDIDD CISSPCENGG TCIDEVNAFI CLCLPSYGGS1080
 1081 LCEKDTEGCD HGWHKFQGHC YRYFAHRRAW EDAERDCRRR AGHLTSIHSS EEHNFINSFG1140
 1141 RENTWIGLND RIVERDFQWT DNTGLQFENW RENQPDNFFA GGEDCVVMVA HESGRWNDVP1200
 1201 CNYNLPYVCK KGTVLCGPPP AVENASPIGA RKAKYNVHAT VRYQCDEGFA QHHVAIIRCR1260
 1261 SNGKWDRPQI ICTKPRRSHR MRRHHHHHQH HHQHRHHKSR KERRKHKKHP AEDWEKEEGN1320
 1321 FC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle