YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76620846
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGALSVWVSG LLTLQMLLFV AGEQGPQHTT AAAATAEKGL HMQKVGSGSV RAALAELVAL  60
   61 PCLFSLRPRP GAAREAPRIK WTKVRTASGQ RQDLPILVAK DNVVRVAKGW QGRVSLPAYP 120
  121 RHRVNATLLL GPLRASDSGL YRCQVVRGIE DEQDLVPLEV TGVVFHYRAA LDRYSLTFAE 180
  181 AQEACLLNSA TIAAPRHLQA AFEDGFDNCD AGWLSDRTVR YPITQSRPGC YGDRSSLPGV 240
  241 RNYGRRDPRE LYDVYCFARE LGGEVFYVGL ARRLTLAGAR AQCRRQGAVL ASVGQLHLAW 300
  301 HEGLDQCDPG WLADGSVRYP IQTPRRRCGG PAPGVRTVYR FANRTGFPAP GERFDAYCFR 360
  361 AHHPTSQHGD PETPSSGDEG EILSAEGPPA GELEPSLQEE EEVVTPDIQE PLVSSGEEES 420
  421 LILAEKQESQ ATPSRAPGVP TLASSPALEA EEVWLSTVAP SHSSVEAGTV VGTHTDTAPA 480
  481 STTPRKRERF KGLNGRHFQQ QEPQQGLKGA LEASIQPPTP EAAENYVEPP MTTGTTDALG 540
  541 SGQSQSPWAV LTNEVEMPRA GSLGGRSPQE PWLWLPTVVP PIIPDPSRAL GLELGEAKRF 600
  601 SMRPVTSDLP WSPSETTPNP SNGPSPTPWK ASPVAISPDL PVMAMLRAPK LWLLSQEPPT 660
  661 SLPTEASGVK GHSEAMATAL PSPASEIEAS PQDPIHLEVY SPPSSSGLAG QDGESTSLSL 720
  721 STSPNSPGAD FGNTRGASPT ELSKAEHPGS SPQASVDWNV VADITISEPA TEPMGARGVS 780
  781 ESESGVFNTA ESPTSSLQAS MDKTQEIWAS LHREGLDPHS PSAPLGVPEV PLMPKFTPGL 840
  841 GPWAATDGGV TVDPMASTVT LDTSDAGGHW EPGSHMVEGA ESPTLSPQMA VDTSVVTSVT 900
  901 SLDLGDKVRV LAVFTVASSS SQPHPEPESQ LVTQGTLGAL EPPQEGSHSG DPILPPWTPT 960
  961 AANKDEPISV SSGEPTVPWD SPSTLLPASL GPEEFELEVL MGSPSVESFW EEAASGEEPA1020
 1021 LPGTPANGSA EEGPLDPCEN NPCLHGGTCR ANGTMYGCSC DQGFAGENCE IDIDDCISSP1080
 1081 CENGGTCIDE VNAFICLCLP SYGGSLCEKD TEGCDHGWHK FQGHCYRYFA HRRAWEDAER1140
 1141 DCRRRAGHLT SIHSSEEHNF INSFGRENTW IGLNDRIVER DFQWTDNTGL QFENWRENQP1200
 1201 DNFFAGGEDC VVMVAHESGR WNDVPCNYNL PYVCKKGTVL CGPPPAVENA SPIGARKAKY1260
 1261 NVHATVRYQC DEGFAQHHVA IIRCRSNGKW DRPQIICTKP RRSHRMRRHH HHHQHHHQHR1320
 1321 HHKSRKERRK HKKHPAEDWE KEEGNFC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle