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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76619364, gi|...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFIMKLHRH FQRTVILLAT FCMVSIIISA YYLYNGYKQE NELSEMALEV DCGDLQHLPY  60
   61 RLMEVKPAKL FDASRTDTTV LVFVESQYSS LGQDIIMILE SSRFQYHIEI APGKGDLPAL 120
  121 TEKSRGKYIL IVYENILKYI NMDAWNRSLL DKYCVEYGVG VIGFHRTSEK SLQSFQLKGF 180
  181 PFSVYGNLAV KDCCINPHSP LLHMTKSSKL EKGSLPGTDW TVFQINHSAY QPVIFAKVKT 240
  241 PENLSPPISK GAFYATVIHD LGLHDGIQRV LFGNNLNFWL HKLIFIDAVS FLSGKRLTLS 300
  301 LDRYILVDID DIFVGKEGTR MNTNDVKALL DTQNLLRAQI TNFTFNLGFS GKFYHTGTEE 360
  361 EDEGDDRLLG SVEEFWWFPH MWSHMQPHLF HNESSLVEQM ILNKKFALEH GIPTDMGYAV 420
  421 APHHSGVYPV HVQLYEAWKK VWNIRITSTE EYPHLKPARY RRGFIHKNIM VLPRQTCGLF 480
  481 THTIFYKEYP GGPKELDKSI QGGELFFTVV LNPISIFMTH LSNYGNDRLG LYTFVNLANF 540
  541 VQSWTNLRLQ TLPPVQLAHK YFELFPDQKD PLWQNPCDDK RHRDIWSKEK TCDRLPKFLV 600
  601 IGPQKTGTTA LYLFLVMHPS ILSNSPSPKT FEEVQFFNRN NYHRGIDWYM DFFPVPSNVT 660
  661 TDFLFEKSAN YFHSEEAPKR AASLVPKAKI ITILIDPSDR AYSWYQHQRS HEDPAALKFS 720
  721 FYEVISAGPR APSELRALQK RCLVPGWYAS HIERWLVYFP PFQLLIIDGQ QLRTDPATVM 780
  781 DEVQKFLGVS PHYNYSEALT FDSHKGFWCQ LLEEGKTKCL GKSKGRKYPP MDPDSRAFLS 840
  841 SYYRDHNVEL SKLLHRLGQP LPSWLRQELQ KVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle