YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76617523
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTWVFLLLL VFRMIMASGG IQAESPKPVC KELMIAKESE DPRDESYSFY EREKNRERET  60
   61 WKPSLVDDRL LDAQPAVCQQ ERKKINLYWF PPDKTCFISR SRAARISALG GNQLPYGELS 120
  121 FGEAYVAENQ CRQITPSRPR TPRVTCVNLE VDLSETGEND PRPNLPPPSS SQREPDGAPG 180
  181 DLSVLLGVVI IDMPELAKSA PAPRKGSKKA VTKAQNKDGK KRKCNCKESY SVYVYKVLKQ 240
  241 VHPDTSISSK AMGIMNSFVN DIFKRIAGEA WHLAHYNKRS TITSREIHTA VHLLLPGELA 300
  301 KHAVSEGTKA VTKYTSSK

Type	Start	End	Confidence
Signal Peptide	1	23	0.90
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	318	0.99