YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76616995
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRGRRSLRG KDRPAPTQCL QTQCFDPLVR NCVACSLLRT TGPRLAGDRS SLAPGTALQP  60
   61 QESAGPGTPA EAEAALPLPA LLFGAPALLG LALALALLGL VTWKRRRRQP GAAVVPEAPE 120
  121 AAEVPESLDV DTTLSPGTLD ATAPIWLLPS EDPAATPPTH SVPVPATELG STELVTTKTA 180
  181 GPELQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	79	0.85
Transmembrane Helix	80	103	0.88
Cytoplasmic	104	185	0.90