YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76616953
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGALNDKPRG PYYVSVPAVA NDHKFGPGTA ALCSQLAEHW DAEDRGRGEA REAALGEVSG  60
   61 IFSHQTQSQV RSQAGFSRVP QQGGIAAPSP APPTRGFWSG SAPPAGPTRR AGRAGGLCVQ 120
  121 TAQWAVAVGG DAGGVWPMGC GLSALTDRRT HTHSATRAPS GPTRAAQFSA GRIVRLPALL 180
  181 PLLPERPGSP CRPPLPGLRR GKGGRRGGPR KPLALYGAAA EAGNSRPWAS GGRARRARVM 240
  241 GRPRPLPRGS RAGLTPGSSS GHTGQSRAAQ AWFFLSSQAG PGCSPSRSTP LGQSRRAKRQ 300
  301 GRPDSSPPRP GPRLRDWPPH WSAQRADVSG RDFPGPNLPR RREAETRLSK PAQAGACVFV 360
  361 PVRQFLGTGS SLLLPPPVRT LGKSFINLIR AGLRGGACAC VGIWSFQGKG PPAHLIMSRR 420
  421 SQRLTRYSSQ GEDDGGSSSS GGSSVMGSQS TLFKDSPLRT LKKKTNNSKR LSPAPQLGPS 480
  481 SDTHTYYSES VVRESYIGSP RAASIAASLT RHSLLDDPYW SEDLRVRRRR GTGGTDSSKP 540
  541 NGLPENKLSE DFLGSSSGYS SEDDYVGYSE TDHQGSGSRL RNAVSRVGSL LWMVVTSPGR 600
  601 LFGLLYWWIG TTWYRLTTAA SLLDVFVLTR RFSSLKMFLW FLLLLLLLTG LTYGAWYFYP 660
  661 FGLQTLHPAV VSWWASKGSI GQREVWESRD SSPHFQAEQR ILSRVHSLER RLDALAAEFS 720
  721 SSWQKEAMRL ERLELQQGAG GQGGGGGGLS HEDTLALLEG LVSRREAALK EDLRRDTAAR 780
  781 IQEELVTLRS EHQQDSEDLF KKIVQASQES EARLQQLKSE WQRMTQESFQ ENAMKELGRL 840
  841 EGQLAGLRQE LAALTLKQSL VEDQVGLLPQ QLQAVRDDVE SQFPAWVSQF LLRGGGTRTG 900
  901 LLQQEEMEAQ LRDLESRILT HVAEMQGKSA REAVASLGLT LQREGVIGVT EEQVHRIVNQ 960
  961 ALKRYSEDRI GMVDYALESG GASVISTRCS ETYETKTALL SLFGIPLWYH SQSPRVILQP1020
 1021 DVHPGNCWAF QGPQGFAVVR LSARIRPTAV TLEHVPKSLS PNSTISSAPK DFAIFGLDED1080
 1081 LQQEGTPLGQ FTYDQDGEPI QTFYFQDPKM ATYQVVELRI LTNWGHPEYT CIYRFRVHGE1140
 1141 PAH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle