YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TOM22_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAAGPGA PLSADELLPK GDAEKPEEEL EEEDDEELDE TLSERLWGLT EMFPERVRSA  60
   61 AGATFDLSLF VAQKMYRFSR AALWIGTTSF MILVLPVVFE TEKLQMEQQQ QLQQRQILLG 120
  121 PNTGLSGGMP GALPSLPGKI

Type	Start	End	Confidence
Cytoplasmic	1	80	0.90
Transmembrane Helix	81	99	0.93
Non-Cytoplasmic	100	140	0.85