YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|61835668
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGQTPLIT MSRGAGRPQG TLRALVFLGV LVGMVVPSPA GTRANGTLLA SRGWGTLLSR  60
   61 SRAGLAGEIA GVNWESGYLV GIKRQRRLYC NVGIGFHLQV PPDGRISGTH EENPYSLLEI 120
  121 STVERGVVSL FGVKSALFVA MNSKGKLYAT PSFQEECKFR ETLLPNNYNA YESDLYRGAY 180
  181 IALSKYGRVK RGSKVSPTMT VTHFLPRI

Type	Start	End	Confidence
Signal Peptide	1	44	0.56
N-region	1	35
H-region	36	41
C-region	42	44
Cleavage Site	44	45
Non-Cytoplasmic	45	208	0.87