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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76616535
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKNKLLYPS LTLLLLLLLP TDASVSGKPQ YMVLVPSLLH TETPEKGCLL LSHLNETVTV  60
   61 SASLESVREN RSLFTDVVAE KDLFHCVSFT LPRSPTSQEV MFLTIQVKGP TQEFKKRTTV 120
  121 LVKNEESLVF VQTDKPIYKP EQTVKFRIVL LDESFHPLNE LVPLVYVEDP KGNRIAQWQN 180
  181 LEVENGLQQL TFPLSSEPFQ GSYKVVVQKG SGGTAEHPFT VEEFVLPKFE VQVRMPKIIT 240
  241 ILEEEVQVSV CGLYTYGKPV PGRVTMNMCR KYRNPSNCYG EESNAVCEKF SGELNNEGCF 300
  301 SQQVNTKIFQ LKRQEFEMKI EVEAKIQEEG TEVELTGKGA TEITTTITKL SFVTVDSNLR 360
  361 RGIPFTGKVL LVDGKGVPMP NKVIFITANE ANHNSNTTTD EHGLAQFSIT TTKIKGTSLS 420
  421 IRVKYKDHSP CYGYQWLSEE HQDAYHSANL VFSRSNSFVY LEPLPRELPC GKTQTVQAHY 480
  481 VLKGQVLKDL KELVFYYLIM AKGGIVRSGT HTLPVEQGDM QGHFSMSVPV ESDIAPVARL 540
  541 LIYAILPDGE VVGDSARYEI EHCLANKVGL NFSPGQSFPA SQAHLRVTAS PQSLCALRAV 600
  601 DQSVLLMRPE AELSAATVYN LLPVKDLSSF PSSVNQQEED NEDCISHDNV YINGIMYFPV 660
  661 SNTNEKDMYS FLQDMGLKAF TNSKIHKPKI CPQPEEHRIQ GKEGLERVWF FFAPEMGRNR 720
  721 DFVHFDDTSE PPTETVRKYF PETWIWDLVV VSSSGVHEVE VTVPDTITEW KAGALCLSRD 780
  781 TGLGLSPTAS LRVFQPFFVE LTMPYSVIRG EAFTLKATVL NYLPKCIRVS VQLEASPAFL 840
  841 AVPEKEQETY CICGNGRQTV SWAVTPKSLG NVNFTVSAEA VESQELCGSE VPVVPEHGRK 900
  901 DTIIKPLLVE PEGLEKEVIF NSLLCPSVDF VFLGAEDGGQ VLRHFPPAAA TDTAADAHDP 960
  961 ARPGAKVSES LSLKLPPNVV EESARASFSV LGDILGSAMR NTQNLLQMPY GCGEQNMARF1020
 1021 APNIYVLDYL NETQQLTAEL KSKAILYLNT GYQRQLLYKH FDGSYSTFGE HRGNSEGNTW1080
 1081 LTAFVLKSFA QARGYIFIDE AHITEALTWL AQKQKSNGCF RSTGTLLNNA IKGGVDDEVT1140
 1141 LSAYITIALL EMPLPVTHPV VRNALFCLDS AWKSAKEGSQ GSHVYTKALL AYAFALAGNQ1200
 1201 ERRTEVLTSL YEEAVKEDNT IHWTRPQKPR LLTEDIYQPR APSAEVEMTA YVILAHVTAQ1260
 1261 PAPNPEDLKR ATSIVKWISK QQNCQGGFSS TQDTVVALHA LSRYGAATFT SARKAAQVTI1320
 1321 QSSGTFSTKF QVENSNRLLL QQVSLPEVPG EYSMSVTGEG CVYLQTSLKY NILPKKDEFP1380
 1381 FALEVQTLPQ TCDGPKAHTS FQISLSVSYI GSRPASNMAI VDVKMVSGFI PLKPTVKMLE1440
 1441 RSNVSRTEVS NNHVLIYLDK VTNETLTLTF TVLQDIPVRD LKPAIVKVYD YYETDEFAVA1500
 1501 EYSAPCSKDI GNA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle