YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VA0E2_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAHSFALPV VIFTTFWGLI GIAGPWFVPK GPNRGVIITM LVATAVCCYL FWLIAILAQL  60
   61 NPLFGPQLKN ETIWYVRFLW E

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.66
Transmembrane Helix	6	28	0.92
Cytoplasmic	29	35	0.62
Transmembrane Helix	36	58	0.92
Non-Cytoplasmic	59	81	0.67