YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76615302
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYLLHARLR AWQGRDMGWA LLTAVLAGGG DDALADFDPT FHHGDGRSHI ASNGSCEIKG  60
   61 PSVACFTPRQ GRAQEEPASS LSWQPHVEWA LGLSGCQPAV NPALAGQLMS DQGAGGQPIK 120
  121 SCQMRKQVGA RWTAAGHRES EMASRAVSGY LLCAVALVFL MLLQGTQSVY IQYQGFQVQL 180
  181 ESVKQLNDLV GQWVPSPGLQ DQSPQPSVCH HPALPLDLRP ICASKDVASI FQALRTIAND 240
  241 DCELCVNVAC TGCS

Type	Start	End	Confidence
Cytoplasmic	1	145	0.67
Transmembrane Helix	146	166	0.74
Non-Cytoplasmic	167	254	0.90