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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76615815
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSALPLHVA LCPEGQLAMA RPAWRWRTLE RCLREVGKAT DSPECFLTIQ DELASKYTSL  60
   61 TKVLYDFNKV LENDRKHGSP LEKLMINNFD DEQIWQQLEL QNEPILQHFQ SAVSETIEDE 120
  121 DISLLPESEE QECEEDMMEL EAAGQEDLEQ DLEEEEVEEA EEVEVSDLSG DDPEADERAK 180
  181 NSSKLDLRKS PDFSDEDSDL DFDISKLERQ SKLSEMETFL ENMEKEEEQR DDQEEDDIDF 240
  241 FEDVDSNEDE GGLFGGQDLK SGKSSRNLKY KDFFDPVESD EDVASVHDDG NELASNEEEE 300
  301 IAEGEESISE TDEDDDLEES GDSKQRKETL KRVTFALPND EDTEDTNVLN VQKDSDEVKS 360
  361 SFEKRQEKMN EKIASLEKEL LEKKPWQLQG EVTAQKRPEN SLLEETLHFD HAVRMAPVIT 420
  421 EETTLQLEDI IKQRIKDQAW DDVVRKEKPK EDAFEYKKRL TLDHEKSKLS LAEIYEQEYI 480
  481 KLNQQKTAEE ENPEHVEIQK MMDSLFLKLD VLSNFHFIPK PPVPEIKVVS NLPAVTMEEV 540
  541 APVSVSDAAL LAPEEVKEKN KAGDIKTAAE KTATDKKRER RKKKYQKHLK IKEKEKRRRL 600
  601 LEKNNPDQAG RYTKAVASEK LKQLTKTGKA SLLKDEGKDK ALKSSQAFFS KLQDQVKMQI 660
  661 SNAKKTEKKK KKNQDISVHK LKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle