YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76614754
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.93
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPGLRGLRC RGLWLLLVTH LCLATACQHA DHGTLLQEFC LPQFQAHMEA VGRTLWCDWG  60
   61 KTIRSYRELS DCTRHVVQKL DCFWPNAEVD KFFLVVHQRY FRNCPVSGRA LQDPPSSILC 120
  121 PFIVVPILVT LLVTVLVVWR SKRPEGIV

Type	Start	End	Confidence
Signal Peptide	1	30	0.91
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	117	0.99
Transmembrane Helix	118	139	0.89
Cytoplasmic	140	148	0.89