YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76614526
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRAAWRALS SIRTQAVTQP PVLGLPGGGC AKLLSVQRDL PSSPGGLILQ AARGYATQKP  60
   61 VQQSQEDDPP PSMLLKDYQN VPGIEKVDDV VKRLISLEMA NKKEMLKIKK EQLMSKVVEN 120
  121 PKDTSSLEAQ IVALTVKIRS YEEHMQKHQK DKAHKRYLLM SIDKRQKMLK NLRKTNYPVF 180
  181 EKTCKELGIE YTFPPPYHRK IHRRLATKKA LCIRVFQEVQ KLKKQKRALK TAAAAVQKQG 240
  241 QRNPESPSEA RSEAIKETQ

Type	Start	End	Confidence
Signal Peptide	1	16	0.55
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	259	0.97