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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76612086
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTSGHFHDS GVGDLDEDPK CPCPSSGDEQ QQQQQQPPPP PPAPPAAPQQ PPGPPLQPQP  60
   61 PQLQQQQQQQ PQHPLSQLTQ LQSQPVHPGL LHSSPTAFRG PPSSNSTAIL HPSSRQGSQL 120
  121 NLNDHLLGHS PSSTATSGPG GGGRHRQASP LVHRRDSNPF TEIAMSSCKY SGGVMKPLSR 180
  181 LSASRRNLIE AEPEGQPLQL FSPSNPPEII ISSREDNHAH QTLLHHPNAT HNHQHAGTTA 240
  241 SSATFPKANK RKNQNIGYKL GHRRALFEKR KRLSDYALIF GMFGIVVMVI ETELSWGLYS 300
  301 KDSMFSLALK CLISLSTIIL LGLIIAYHTR EVQLFVIDNG ADDWRIAMTY ERILYISLEM 360
  361 LVCAIHPIPG EYKFFWTARL AFSYTPSRAE ADVDIILSIP MFLRLYLIAR VMLLHSKLFT 420
  421 DASSRSIGAL NKINFNTRFV MKTLMTICPG TVLLVFSISL WIIAAWTVRV CERYHDQQDV 480
  481 TSNFLGAMWL ISITFLSIGY GDMVPHTYCG KGVCLLTGIM GAGCTALVVA VVARKLELTK 540
  541 AEKHVHNFMM DTQLTKRIKN AAANVLRETW LIYKHTKLLK KIDHAKVRKH QRKFLQAIHQ 600
  601 LRSVKMEQRK LSDQANTLVD LSKMQNVMYD LITELNDRSE DLEKQIGSLE SKLEHLTASF 660
  661 NSLPLLIADT LRQQQQQLLS ALMEARGVSV AVGTTHTPLS DSPIGVSSTS FPTPYTSSSS 720
  721 C

YRC Informatics Platform - Version 3.0
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