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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76611545
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTTATAEL GWIVHPPSGW EEVSGYDENM NTIRTYQVCN VFESSQNNWL RTKFIRRRGA  60
   61 HRIHVEMKFS VRDCSSIPSV PGSCKETFNL YYYEADFDSA TKTFPTWMEN PWVKVDTIAA 120
  121 DESFSQVDLG GRVMKINTEV RSFGPVSRSG FYLAFQDYGG CMSLIAVRVF YRKCPRIIQN 180
  181 GAVFQETLSG AESTSLVAAR GSCIANAEEV DVPIKLYCNG DGEWLVPIGR CMCKAGFEAV 240
  241 ENGTVCRGCP SGTFKANQGD EACTHCPINS RTTSEGATNC VCRNGYYRAD LDPVDMPCTT 300
  301 IPSAPQAVIS SVNETSLMLE WTPPRDSGGR EDLVYNIICK SCGSGRGACT RCGDNVQYAP 360
  361 RQLGLTEPRI YISDLLAHTQ YTFEIQAVNG VTDQSPFSPQ FASVNITTNQ AAPSAVSIMH 420
  421 QVSRTVDSIT LSWSQPDQPN GVILDYELQY YEKELSEYNA TAIKSPTNTV TVQGLKAGAI 480
  481 YVFQVRARTV AGYGRYSGKM YFQTMTEAEY QTSIQEKLPL IIGSSAAGLV FLIAVVVIAI 540
  541 VCNRRRGFER ADSEYTDKLQ HYTSGHSTYT SAGPAPWDPS LVMTPGMKIY IDPFTYEDPN 600
  601 EAVREFAKEI DISCVKIEQV IGAGEFGEVC SGHLKLPGKR EIFVAIKTLK SGYTEKQRRD 660
  661 FLSEASIMGQ FDHPNVIHLE GVVTKSTPVM IITEFMENGS LDSFLRQNDG QFTVIQLVGM 720
  721 LRGIAAGMKY LADMNYVHRD LAARNILVNS NLVCKVSDFG LSRFLEDDTS DPTYTSALGG 780
  781 KIPIRWTAPE AIQYRKFTSA SDVWSYGIVM WEVMSYGERP YWDMTNQDVI NAIEQDYRLP 840
  841 PPMDCPSALH QLMLDCWQKD RNHRPKFGQI VNTLDKMIRN PNSLKAMAPL SSGINLPLLD 900
  901 RTIPDYTSFN TVDEWLEAIK MGQYKESFAN AGFTSFDVVS QMMMEDILRV GVTLAGHQKK 960
  961 ILNSIQVMRA QMNQIQSVEV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle