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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76611513
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTTATAEL GWIVHPPSGW EEVSGYDENM NTIRTYQVCN VFESSQNNWL RTKFIRRRGA  60
   61 HRIHVEMKFS VRDCSSIPSV PGSCKETFNL YYYEADFDSA TKTFPTWMEN PWVKVDTIAA 120
  121 DESFSQVDLG GRVMKINTEV RSFGPVSRSG FYLAFQDYGG CMSLIAVRVF YRKCPRIIQN 180
  181 GAVFQETLSG AESTSLVAAR GSCIANAEEV DVPIKLYCNG DGEWLVPIGR CMCKAGFEAV 240
  241 ENGTVCRGCP SGTFKANQGD EACTHCPINS RTTSEGATNC VCRNGYYRAD LDPVDMPCTT 300
  301 IPSAPQAVIS SVNETSLMLE WTPPRDSGGR EDLVYNIICK SCGSGRGACT RCGDNVQYAP 360
  361 RQLGLTEPRI YISDLLAHTQ YTFEIQAVNG VTDQSPFSPQ FASVNITTNQ AAPSAVSIMH 420
  421 QVSRTVDSIT LSWSQPDQPN GVILDYELQY YEKELSEYNA TAIKSPTNTV TVQGLKAGAI 480
  481 YVFQVRARTV AGYGRYSGKM YFQTMTEVRC ASSPAEYQTS IQEKLPLIIG SSAAGLVFLI 540
  541 AVVVIAIVSG FCCFVFFSKH GQDPGRLHRG GGIRPGHKVT PGMKIYIDPF TYEDPNEAVR 600
  601 EFAKEIDISC VKIEQVIGAG EFGEVCSGHL KLPGKREIFV AIKTLKSGYT EKQRRDFLSE 660
  661 ASIMGQFDHP NVIHLEGVVT KSTPVMIITE FMENGSLDSF LRQNDGQFTV IQLVGMLRGI 720
  721 AAGMKYLADM NYVHRDLAAR NILVNSNLVC KVSDFGLSRF LEDDTSDPTY TSGGKIPIRW 780
  781 TAPEAIQYRK FTSASDVWSY GIVMWEVMSY GERPYWDMTN QDVINAIEQD YRLPPPMDCP 840
  841 SALHQLMLDC WQKDRNHRPK FGQIVNTLDK MIRNPNSLKA MAPLSSGINL PLLDRTIPDY 900
  901 TSFNTVDEWL EAIKMGQYKE SFANAGFTSF DVVSQMMMED ILRVGVTLAG HQKKILNSIQ 960
  961 VMRAQMNQIQ SVEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle