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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76611485
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTTATAEL GWIVHPPSGW EEVSGYDENM NTIRTYQVCN VFESSQNNWL RTKFIRRRGA  60
   61 HRIHVEMKFS VRDCSSIPSV PGSCKETFNL YYYEADFDSA TKTFPTWMEN PWVKVDTIAA 120
  121 DESFSQVDLG GRVMKINTEV RSFGPVSRSG FYLAFQDYGG CMSLIAVRVF YRKCPRIIQN 180
  181 GAVFQETLSG AESTSLVAAR GSCIANAEEV DVPIKLYCNG DGEWLVPIGR CMCKAGFEER 240
  241 DRQCMCCPSG TFKANQGDEA CTHCPINSRT TSEGATNCVC RNGYYRADLD PVDMPCTTIP 300
  301 SAPQAVISSV NETSLMLEWT PPRDSGGRED LVYNIICKSC GSGRGACTRC GDNVQYAPRQ 360
  361 LGLTEPRIYI SDLLAHTQYT FEIQAVNGVT DQSPFSPQFA SVNITTNQAA PSAVSIMHQV 420
  421 SRTVDSITLS WSQPDQPNGV ILDYELQYYE KELSEYNATA IKSPTNTVTV QGLKAGAIYV 480
  481 FQVRARTVAG YGRYSGKMYF QTMTEGLPIH SAIPEQAVFL MLIWECCAGS LLLLVITFLP 540
  541 RSKRGRISPS SVGKEVKMTP GMKIYIDPFT YEDPNEAVRE FAKEIDISCV KIEQVIGAGE 600
  601 FGEVCSGHLK LPGKREIFVA IKTLKSGYTE KQRRDFLSEA SIMGQFDHPN VIHLEGVVTK 660
  661 STPVMIITEF MENGSLDSFL RQNDGQFTVI QLVGMLRGIA AGMKYLADMN YVHRDLAARN 720
  721 ILVNSNLVCK VSDFGLSRFL EDDTSDPTYT SGGKIPIRWT APEAIQYRKF TSASDVWSYG 780
  781 IVMWEVMSYG ERPYWDMTNQ DVINAIEQDY RLPPPMDCPS ALHQLMLDCW QKDRNHRPKF 840
  841 GQIVNTLDKM IRNPNSLKAM APLSSGINLP LLDRTIPDYT SFNTVDEWLE AIKMGQYKES 900
  901 FANAGFTSFD VVSQMMMEDI LRVGVTLAGH QKKILNSIQV MRAQMNQIQS VEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle