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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76611074
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSCPKLGT PPPPNLPLSA QAPRPHREAH RAVLPRVSRP LNVSTSVGAG PLRERLPAET  60
   61 RQGGTMWRRP LGLLLLLLLL LAGELGVGAR RGRRRRELAP ALHRRGIRDA GGRYCQEQDL 120
  121 CCRGRADDCA LPYLGVTCYC DLFCNRTVSD CCPDFWDFCL GVPPPFPPIQ GCMHKGRIYP 180
  181 VLGTYWDNCN RCTCHEKERW ECDQEPCLVD EDMIEAINHG DYGWRAGNHS AFWGMTLDEG 240
  241 IRYRLGTVRP SSFVANMNEI HTVLGPGEVL PRTFEASEKW PNLIHDPLDQ GNCAGSWAFS 300
  301 TAAVASDRVS IHSLGHMSPV LSPQNLLSCD THNQQGCRGG RLDGAWWFLR RRGVVSDHCY 360
  361 PFSGHGRDEA VPAPPCMMHS RAMGRGKRQA TARCPNSYVH ANDIYQVTPA YRLGSNEKEI 420
  421 MKELMENGPV QALMEVHEDF FLYQSGIYSH TPVSLGRPER YRRHGTHSVK ITGWGEETLP 480
  481 DGRTIKYWTA ANSWGPAWGE RGHFRIVRGA NECDIESFVL GVWGRVGMED MGHH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle