YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76610797
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIGGLSWQT TQEGLREYFG QFGEVKECLV MRDPLTKRSR GFGFVTFMDQ AGVDKVLAQS  60
   61 RHELDSKTID PKVAFPRRAQ PKMVTRTKKI FVGGLSVNTT VEDVKQYFEQ FGKVDDAMLM 120
  121 FDKTTNRHRG FGFVTFESED IVEKVCEIHF HEINNKMVEC KKAQPKEVMS PTGSARGRSR 180
  181 VMPYGMDAFM LGIGMLGYPG FQATTYASRS YTGLAPGYTY QFPEFRVERT PLPSAPVLPE 240
  241 LTAIPLTAYG PMAAAAAAAA VVRGTGSHPW TMAPPPGSTP SRTGGFLGTT SPGPMAELYG 300
  301 AANQDSGVSS YISAASPAPS TGFGHSLGGP LIATAFTNGY H

Type	Start	End	Confidence
Cytoplasmic	1	183	0.91
Transmembrane Helix	184	203	0.83
Non-Cytoplasmic	204	242	0.91
Transmembrane Helix	243	264	0.80
Cytoplasmic	265	341	0.68