YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76610718
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWAPHLSAAP APALASRPRV PRARPSPAGD GGGPATMIHF ILLFSRQGKL RLQKWYTTLP  60
   61 DKERKKITRE IVQIILSRGQ RTSSFVDWKE LKLVYKRYAS LYFCCAVENQ DNELLTLEIV 120
  121 HRYVELLDKY FGNVCELDII FNFEKAYFIL DEFIIGGEIQ ETSKKSAVKA IEDSDMLQET 180
  181 MEEYMNKPTF

Type	Start	End	Confidence
Signal Peptide	1	15	0.64
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	190	0.96