YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76610361
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLTAVLLLL AACAGSAQGL GSFVHCEPCD EKALSMCPPS PLGCELVKEP GCGCCMTCAL  60
   61 AEGQSCGVYT ERCAQGLRCL PRQDEEKPLH ALLHGRGVCL NEKSYREQAK IERDSREHEE 120
  121 PTTSEMAEET YSPKIFRPKH TRISELKAEA VKKDRRKKLT QSKFVGGAEN TAHPRVISAP 180
  181 EMRQKSEQVT PWGLATPLTP PIRTQGPCRR HMEASLQELK ASPRMVPRAV YLPNCDRKGF 240
  241 YKRKQCKPSR GRKRGICWCV DKYGMKLPGM EYVDGDFQCH TFDSSNVE

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	288	0.99