YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76610341
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.36
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAASGLVNK DAVVQFLIRL PFKVFRRGKR SAGRGGRRAV GGPAAGSVCA AGARATLRPG  60
   61 AKLTQCLTMD SRPEEYELNG DLRPSSHGSP GASPSRWGRN QPINMNHYAN KKSAAESMLD 120
  121 IALLMANASQ LKAVIEQGPG FAFFIPLVVL ISISLALQIA VGVLLIFLVR YDLNNPAKHA 180
  181 KLDFLNNLAT GLVFIIVVVN IFITAFGVQK PTMDMAPRQ

Type	Start	End	Confidence
Cytoplasmic	1	38	0.82
Transmembrane Helix	39	55	0.36
Non-Cytoplasmic	56	142	0.51
Transmembrane Helix	143	169	0.87
Cytoplasmic	170	183	0.60
Transmembrane Helix	184	208	0.86
Non-Cytoplasmic	209	219	0.62