YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76607912
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLGTNSLPR IPKQFEATGC CTVSLLRCVR FLPLTFHAPG GGQSGSARVF WRPVLHLPRA  60
   61 RLARPDSPAS SVGPRPARVQ TRSPPRPGPV VGASAPPESP LALAARPPGA ERRSQRPEKK 120
  121 RASETEGVAG AGGGAAKMVA KQRIRMANEK HSKNITQRGN VAKTSRNAPE EKASVGPWLL 180
  181 ALFIFVVCGS AIFQIIQSIR MGM

Type	Start	End	Confidence
Cytoplasmic	1	174	0.68
Transmembrane Helix	175	196	0.93
Non-Cytoplasmic	197	203	0.60