YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76607681
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSTCYILML AFGTTGMLTA GNSPRKHEDL ILALLEAVQL LTQVALIHCR GHRGNGSFMQ  60
   61 NKYFKSGLAC FLEEDDRSWD SRDDESIINP CWELKSQLYL FVKKMTLRTF EEMIPTNPEK 120
  121 QYNPYLEREK GPKRVAAHIT GSNRKKSTLP VPGSKNEKAV GHKINSWESS RKGHSFLNNL 180
  181 YLRNGELVIL QTGFYYIYSQ TYFRFQEPEE VLGTVSTEEN RKKIKQMVQY IYKYTNYPDP 240
  241 ILLMKSARNS CWSKDSEYGL YSIYQGGIFE LKENDRIFVS VTNERLVDLD QEASFFGAFL 300
  301 IG

Type	Start	End	Confidence
Signal Peptide	1	20	0.82
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	302	0.98