YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|61818451
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPAPGAGA ASGGAGCSGG GAGAGSGSGA GGRLPSRVLE LVFSYLELSE LRSCALVCKH  60
   61 WYRCLHGDEN SEVWRSLCAR SLAEEALRTD ILCNLPSYKA KIRAFQHAFS TNDCSRNVYI 120
  121 KKNGFTLHRN PIAQSTDGAR TKIGFSEGRH AWEVWWEGPL GTVAVIGIAT KRAPMQCQGY 180
  181 VALLGSDDQS WGWNLVDNNL LHNGEVNGSF PQCNNAPKYQ IGERIRVILD MEDKTLAFER 240
  241 GYEFLGVAFR GLPKVCLYPA VSAVYGNTEV TLVYLGKPLD G

Type	Start	End	Confidence
Signal Peptide	1	24	0.85
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	281	0.98